HLA-DPB1

Chr 6

major histocompatibility complex, class II, DP beta 1

Also known as: DPB1, HLA-DP, HLA-DP1B, HLA-DPB

HLA-DPB belongs to the HLA class II beta chain paralogues. This class II molecule is a heterodimer consisting of an alpha (DPA) and a beta chain (DPB), both anchored in the membrane. It plays a central role in the immune system by presenting peptides derived from extracellular proteins. Class II molecules are expressed in antigen presenting cells (APC: B lymphocytes, dendritic cells, macrophages). The beta chain is approximately 26-28 kDa and its gene contains 6 exons. Exon one encodes the leader peptide, exons 2 and 3 encode the two extracellular domains, exon 4 encodes the transmembrane domain and exon 5 encodes the cytoplasmic tail. Within the DP molecule both the alpha chain and the beta chain contain the polymorphisms specifying the peptide binding specificities, resulting in up to 4 different molecules. [provided by RefSeq, Jul 2008]

ResearchGenerating clinical summary…
2
Active trials
125
Pubs (1 yr)
P/LP submissions
P/LP missense
1.60
LOEUF
DN
Mechanism· predicted
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.60LOEUF
pLI 0.000
Z-score -0.12
OE 1.03 (0.681.60)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
1.40Z-score
OE missense 0.67 (0.570.80)
98 obs / 145.6 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?1.03 (0.681.60)
00.351.4
Missense OE?0.67 (0.570.80)
00.61.4
Synonymous OE?0.78
01.21.6
LoF obs/exp: 14 / 13.5Missense obs/exp: 98 / 145.6Syn Z: 1.39

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

HLA-DPB1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.