HLA-DPA1

Chr 6

major histocompatibility complex, class II, DP alpha 1

Also known as: DP(W3), DP(W4), DPA1, HLA-DP1A, HLA-DPA, HLADP, HLASB, PLT1

HLA-DPA1 belongs to the HLA class II alpha chain paralogues. This class II molecule is a heterodimer consisting of an alpha (DPA) and a beta (DPB) chain, both anchored in the membrane. It plays a central role in the immune system by presenting peptides derived from extracellular proteins. Class II molecules are expressed in antigen presenting cells (APC: B lymphocytes, dendritic cells, macrophages). The alpha chain is approximately 33-35 kDa and its gene contains 5 exons. Exon one encodes the leader peptide, exons 2 and 3 encode the two extracellular domains, exon 4 encodes the transmembrane domain and the cytoplasmic tail. Within the DP molecule both the alpha chain and the beta chain contain the polymorphisms specifying the peptide binding specificities, resulting in up to 4 different molecules. [provided by RefSeq, Jul 2008]

ResearchGenerating clinical summary…
2
Active trials
72
Pubs (1 yr)
P/LP submissions
P/LP missense
1.57
LOEUF
Multiple*
Mechanism· predicted
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.57LOEUF
pLI 0.000
Z-score 0.26
OE 0.91 (0.551.57)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
1.12Z-score
OE missense 0.74 (0.640.87)
110 obs / 148.2 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.91 (0.551.57)
00.351.4
Missense OE?0.74 (0.640.87)
00.61.4
Synonymous OE?0.82
01.21.6
LoF obs/exp: 9 / 9.9Missense obs/exp: 110 / 148.2Syn Z: 1.11

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

HLA-DPA1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.