HERC1

Chr 15AR

HECT and RLD domain containing E3 ubiquitin protein ligase family member 1

Also known as: MDFPMR, p532, p619

This gen encodes a member of the HERC protein family. This protein stimulates guanine nucleotide exchange on ARF1 and Rab proteins. This protein may be involved in membrane transport processes. [provided by RefSeq, Mar 2012]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Macrocephaly, dysmorphic facies, and psychomotor retardationMIM #617011
AR

Clinical highlights

Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype) and the gene is intolerant of it in the population — truncating, frameshift and canonical splice variants carry more prior weight here than missense.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
9
Pubs (1 yr)
P/LP submissions
P/LP missense
0.24
LOEUF· LoF intol.
LOF
Mechanism· G2P

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Dual constrained — LoF & missense intolerant
LoF Constraint?
0.24LOEUF
pLI 1.000
Z-score 11.79
OE 0.19 (0.150.24)
Highly constrained

Highly LoF-intolerant (top ~10% of genes)

Missense Constraint?
4.96Z-score
OE missense 0.72 (0.690.75)
1838 obs / 2541.0 exp
Constrained

Highly missense-constrained (top ~0.1%)

Observed / Expected Ratios?
LoF OE?0.19 (0.150.24)
00.351.4
Missense OE?0.72 (0.690.75)
00.61.4
Synonymous OE?1.02
01.21.6
LoF obs/exp: 46 / 245.4Missense obs/exp: 1838 / 2541.0Syn Z: -0.59

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

HERC1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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