GULP1

Chr 2

GULP PTB domain containing engulfment adaptor 1

Also known as: CED-6, CED6, GULP

GULP1 encodes an adapter protein required for efficient phagocytosis of apoptotic cells and modulates cellular glycosphingolipid and cholesterol transport. The gene shows high constraint against loss-of-function variants (LOEUF 0.459), suggesting mutations would likely cause significant clinical effects, but no specific Mendelian disease has been definitively associated with GULP1 variants to date. Based on the constraint metrics, any pathogenic variants would likely follow an autosomal dominant inheritance pattern.

OMIMResearchSummary from RefSeq, UniProt
DNmechanismLOEUF 0.46
Clinical SummaryGULP1
Population Constraint (gnomAD)
Moderately constrained gene (pLI 0.69) — some intolerance to loss-of-function variants.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint
0.46LOEUF
pLI 0.687
Z-score 3.13
OE 0.18 (0.080.46)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint
0.98Z-score
OE missense 0.78 (0.670.91)
122 obs / 156.6 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.18 (0.080.46)
00.351.4
Missense OE0.78 (0.670.91)
00.61.4
Synonymous OE0.88
01.21.6
LoF obs/exp: 3 / 16.9Missense obs/exp: 122 / 156.6Syn Z: 0.72
DN
0.6453th %ile
GOF
0.4677th %ile
LOF
0.52top 25%

The highest-scoring mechanism for this gene is dominant-negative.

DNprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

GULP1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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