GTF3C1

Chr 16

general transcription factor IIIC subunit 1

Also known as: TFIIIC, TFIIIC220, TFIIICalpha

Enables RNA polymerase III general transcription initiation factor activity. Involved in transcription initiation at RNA polymerase III promoter. Located in nucleoplasm. Part of transcription factor TFIIIC complex. [provided by Alliance of Genome Resources, Jun 2026]

OMIMResearchGenerating clinical summary…

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
2
Pubs (1 yr)
P/LP submissions
P/LP missense
0.17
LOEUF· LoF intol.
LOF
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Dual constrained — LoF & missense intolerant
LoF Constraint?
0.17LOEUF
pLI 1.000
Z-score 8.52
OE 0.10 (0.070.17)
Highly constrained

Highly LoF-intolerant (top ~10% of genes)

Missense Constraint?
3.26Z-score
OE missense 0.74 (0.700.78)
950 obs / 1278.2 exp
Constrained

Highly missense-constrained (top ~0.1%)

Observed / Expected Ratios?
LoF OE?0.10 (0.070.17)
00.351.4
Missense OE?0.74 (0.700.78)
00.61.4
Synonymous OE?1.04
01.21.6
LoF obs/exp: 11 / 105.5Missense obs/exp: 950 / 1278.2Syn Z: -0.79

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

GTF3C1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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