GPIHBP1

Chr 8AR

glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1

Also known as: GPI-HBP1, HYPL1D

The encoded glycosylphosphatidylinositol-anchored protein transports lipoprotein lipase from the subendothelial spaces to the capillary lumen and anchors it on endothelial cell surfaces, facilitating triglyceride metabolism and lipid homeostasis. Mutations cause hyperlipoproteinemia type 1D, characterized by severe hypertriglyceridemia that typically presents in infancy with failure to thrive, recurrent pancreatitis, and eruptive xanthomas. This condition follows autosomal recessive inheritance.

OMIMResearchSummary from RefSeq, OMIM, UniProt
DNmechanismARLOEUF 1.101 OMIM phenotype
Clinical SummaryGPIHBP1
Population Constraint (gnomAD)
Constrained for loss-of-function variants (OE-LoF 0.35) despite low pLI — interpret in context.
💊
Clinical Trials
1 active or recruiting trial — potential therapeutic options may be available

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.10LOEUF
pLI 0.139
Z-score 1.44
OE 0.35 (0.141.10)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
0.04Z-score
OE missense 0.99 (0.851.16)
110 obs / 111.3 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.35 (0.141.10)
00.351.4
Missense OE0.99 (0.851.16)
00.61.4
Synonymous OE0.89
01.21.6
LoF obs/exp: 2 / 5.7Missense obs/exp: 110 / 111.3Syn Z: 0.60
DN
0.6161th %ile
GOF
0.3689th %ile
LOF
0.2872th %ile

The highest-scoring mechanism for this gene is dominant-negative.

DNprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

GPIHBP1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold
Clinical Literature
Open Research Assistant →