GP1BA

Chr 17ARAD

glycoprotein Ib platelet subunit alpha

GP-Ib, a surface membrane protein of platelets, participates in the formation of platelet plugs by binding to the A1 domain of vWF, which is already bound to the subendothelium

Primary Disease Associations & Inheritance

{Nonarteritic anterior ischemic optic neuropathy, susceptibility to}MIM #258660
AR
Bernard-Soulier syndrome, type A1 (recessive)MIM #231200
AR
Bernard-Soulier syndrome, type A2 (dominant)MIM #153670
AD
von Willebrand disease, platelet-typeMIM #177820
AD
UniProtNon-arteritic anterior ischemic optic neuropathy
0
ClinVar variants
0
Pathogenic / LP
0.00
pLI score
0
Active trials
Clinical SummaryGP1BA
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Gene-Disease Validity (ClinGen)
Bernard-Soulier syndrome · ARDefinitive

Definitive — sufficient evidence for diagnostic panels

2 total gene-disease associations curated

Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?LOEUF (Loss-of-function Observed/Expected Upper bound Fraction) is the upper bound of the 90% CI for LoF OE — the preferred gnomAD v4 metric. Lower = more intolerant to LoF. LOEUF < 0.35 = highly constrained.
1.66LOEUF
pLI 0.003
Z-score 0.46
OE 0.78 (0.381.66)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?Missense Z-score: standard deviations fewer missense variants observed vs. expected. Z > 3.09 (p < 0.001) = gene does not tolerate missense variation. OE missense < 0.6 is also considered constrained.
-0.30Z-score
OE missense 1.05 (0.961.14)
368 obs / 352.0 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?Shaded band = 90% confidence interval. Vertical tick = point estimate. Grey threshold line = gnomAD constraint cutoff for that variant class.
LoF OE?Ratio of observed to expected LoF variants. Upper CI bound (LOEUF) ≤ 0.35 = strong LoF constraint signal.0.78 (0.381.66)
00.351.4
Missense OE?Ratio of observed to expected missense variants. OE ≤ 0.6 = fewer missense variants than expected by chance.1.05 (0.961.14)
00.61.4
Synonymous OE?Control metric — synonymous variants are largely neutral and expected near OE = 1.0. Significant deviation may indicate annotation issues.1.08
01.21.6
LoF obs/exp: 4 / 5.1Missense obs/exp: 368 / 352.0Syn Z: -0.81

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

GP1BA · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

OMIM — Genotype-Phenotype Relationships

1 OMIM entry

{Nonarteritic anterior ischemic optic neuropathy, susceptibility to}

MIM #258660

Molecular basis of disorder known

Autosomal recessive

Bernard-Soulier syndrome, type A1 (recessive)

MIM #231200

Molecular basis of disorder known

Autosomal recessive

Bernard-Soulier syndrome, type A2 (dominant)

MIM #153670

Molecular basis of disorder known

Autosomal dominant

von Willebrand disease, platelet-type

MIM #177820

Molecular basis of disorder known

Autosomal dominant
Clinical Literature
Landmark / reviewRecent case evidence
Key Publications
Landmark & review papers · by relevance
PubMed
A GP1BA Variant in a Czech Family with Monoallelic Bernard-Soulier Syndrome.
Skalníková M et al.·Int J Mol Sci
2022Case report
Top 10 resultsSearch PubMed ↗

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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