GOLGA8R

Chr 15

golgin A8 family member R

The protein is predicted to be involved in Golgi apparatus organization and is located in various Golgi compartments including the cis cisterna and cis-Golgi network. This gene shows extremely low constraint against loss-of-function variants (pLI near zero), suggesting that complete loss of function may be well-tolerated. No established human disease associations have been reported for mutations in this gene.

ResearchSummary from RefSeq
MultiplemechanismLOEUF 1.98
Clinical SummaryGOLGA8R
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.98LOEUF
pLI 0.000
Z-score -3.35
OE 2.63 (1.301.98)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
-1.24Z-score
OE missense 1.63 (1.291.93)
50 obs / 30.7 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios
LoF OE2.63 (1.301.98)
00.351.4
Missense OE1.63 (1.291.93)
00.61.4
Synonymous OE1.40
01.21.6
LoF obs/exp: 13 / 4.9Missense obs/exp: 50 / 30.7Syn Z: -1.02
DN
0.73top 25%
GOF
0.72top 25%
LOF
0.2580th %ile

This gene has evidence for multiple mechanisms of pathogenicity (dominant-negative and gain-of-function). Both the Badonyi & Marsh prediction and the broader genomic evidence point to dominant-negative as the predominant mechanism. Different variants in this gene may act through different mechanisms — interpret in context of the specific variant.

DNprediction above median
GOFprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

GOLGA8R · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →
Clinical Literature
Open Research Assistant →
Recent Gene-Specific Literature
Gene in title · MEDLINE · newest first
Europe PMC

No open access results found