GNS

Chr 12AR

glucosamine (N-acetyl)-6-sulfatase

Also known as: G6S

The product of this gene is a lysosomal enzyme found in all cells. It is involved in the catabolism of heparin, heparan sulphate, and keratan sulphate. Deficiency of this enzyme results in the accumulation of undegraded substrate and the lysosomal storage disorder mucopolysaccharidosis type IIID (Sanfilippo D syndrome). Mucopolysaccharidosis type IIID is the least common of the four subtypes of Sanfilippo syndrome. [provided by RefSeq, Jul 2008]

GeneReviewsOMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Mucopolysaccharidosis type IIIDMIM #252940
AR

Clinical highlights

Gene-disease validity (ClinGen)
mucopolysaccharidosis type 3D · ARDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype), though the gene is not strongly LoF-constrained in the population — weigh truncating variants against that tolerance.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
127
Pubs (1 yr)
P/LP submissions
P/LP missense
0.61
LOEUF
LOF
Mechanism· G2P
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GeneReview available — GNS
Authoritative clinical overview · Recommended first read
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Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
0.61LOEUF
pLI 0.001
Z-score 3.22
OE 0.37 (0.230.61)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?
1.37Z-score
OE missense 0.78 (0.700.87)
234 obs / 301.1 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.37 (0.230.61)
00.351.4
Missense OE?0.78 (0.700.87)
00.61.4
Synonymous OE?0.96
01.21.6
LoF obs/exp: 11 / 30.1Missense obs/exp: 234 / 301.1Syn Z: 0.33

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

GNS · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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