GAGE2E

Chr X

G antigen 2E

Also known as: GAGE-2E, GAGE8

I cannot provide a clinical gene summary for GAGE2E as no functional or clinical information has been provided in the data. Without details about the protein function, associated diseases, inheritance patterns, or clinical phenotypes, it would be inappropriate to make any claims about this gene's clinical significance.

Multiplemechanism
Clinical SummaryGAGE2E
📋
ClinVar Variants
80 unique Pathogenic / Likely Pathogenic· 18 VUS of 100 total submissions

Population Genetics & Constraint

Constraint data not available from gnomAD.

DN
0.75top 25%
GOF
0.6639th %ile
LOF
0.11100th %ile

This gene has evidence for multiple mechanisms of pathogenicity (dominant-negative and gain-of-function). Both the Badonyi & Marsh prediction and the broader genomic evidence point to dominant-negative as the predominant mechanism. Different variants in this gene may act through different mechanisms — interpret in context of the specific variant.

DNprediction above median
GOFprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

100 submitted variants in ClinVar

Classification Summary

Pathogenic78
Likely Pathogenic2
VUS18
Likely Benign2
78
Pathogenic
2
Likely Pathogenic
18
VUS
2
Likely Benign

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
0
0
78
0
78
Likely Pathogenic
0
0
2
0
2
VUS
0
12
6
0
18
Likely Benign
0
2
0
0
2
Benign
0
0
0
0
0
Total014860100

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

GAGE2E · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →
Clinical Literature
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