FUS

Chr 16AD

FUS RNA binding protein

Also known as: ALS6, ETM4, FUS1, HNRNPP2, POMP75, TLS, altFUS

This gene encodes a multifunctional protein component of the heterogeneous nuclear ribonucleoprotein (hnRNP) complex. The hnRNP complex is involved in pre-mRNA splicing and the export of fully processed mRNA to the cytoplasm. This protein belongs to the FET family of RNA-binding proteins which have been implicated in cellular processes that include regulation of gene expression, maintenance of genomic integrity and mRNA/microRNA processing. Alternative splicing results in multiple transcript variants. Defects in this gene result in amyotrophic lateral sclerosis type 6. [provided by RefSeq, Sep 2009]

Primary Disease Associations & Inheritance

Amyotrophic lateral sclerosis 6, with or without frontotemporal dementiaMIM #608030
Essential tremor, hereditary, 4MIM #614782
AD
UniProtAngiomatoid fibrous histiocytoma
549
ClinVar variants
45
Pathogenic / LP
1.00
pLI score· haploinsufficient
5
Active trials
Clinical SummaryFUS
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Gene-Disease Validity (ClinGen)
amyotrophic lateral sclerosis type 6 · ADDefinitive

Definitive — sufficient evidence for diagnostic panels

Population Constraint (gnomAD)
Highly constrained gene — heterozygous loss-of-function variants are very rare in the population (pLI 1.00). One damaged copy is likely sufficient to cause disease.
📋
ClinVar Variants
45 Pathogenic / Likely Pathogenic· 251 VUS of 549 total submissions
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Clinical Trials
5 active or recruiting trials — potential therapeutic options may be available

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

LoF intolerant — likely haploinsufficient
LoF Constraint?LOEUF (Loss-of-function Observed/Expected Upper bound Fraction) is the upper bound of the 90% CI for LoF OE — the preferred gnomAD v4 metric. Lower = more intolerant to LoF. LOEUF < 0.35 = highly constrained.
0.24LOEUF
pLI 0.999
Z-score 5.16
OE 0.10 (0.050.24)
Highly constrained

Highly LoF-intolerant (top ~10% of genes)

Missense Constraint?Missense Z-score: standard deviations fewer missense variants observed vs. expected. Z > 3.09 (p < 0.001) = gene does not tolerate missense variation. OE missense < 0.6 is also considered constrained.
2.21Z-score
OE missense 0.66 (0.590.74)
217 obs / 329.7 exp
Mild constraint

Moderately missense-constrained (top ~2.5%)

Observed / Expected Ratios?Shaded band = 90% confidence interval. Vertical tick = point estimate. Grey threshold line = gnomAD constraint cutoff for that variant class.
LoF OE?Ratio of observed to expected LoF variants. Upper CI bound (LOEUF) ≤ 0.35 = strong LoF constraint signal.0.10 (0.050.24)
00.351.4
Missense OE?Ratio of observed to expected missense variants. OE ≤ 0.6 = fewer missense variants than expected by chance.0.66 (0.590.74)
00.61.4
Synonymous OE?Control metric — synonymous variants are largely neutral and expected near OE = 1.0. Significant deviation may indicate annotation issues.1.25
01.21.6
LoF obs/exp: 4 / 38.6Missense obs/exp: 217 / 329.7Syn Z: -2.13

ClinVar Variant Classifications

549 submitted variants in ClinVar

Classification Summary

Pathogenic26
Likely Pathogenic19
VUS251
Likely Benign199
Benign20
Conflicting34
26
Pathogenic
19
Likely Pathogenic
251
VUS
199
Likely Benign
20
Benign
34
Conflicting

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
11
5
10
0
26
Likely Pathogenic
8
9
2
0
19
VUS
5
148
95
3
251
Likely Benign
1
6
110
82
199
Benign
0
0
19
1
20
Conflicting
34
Total2516823686549

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

FUS · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

OMIM — Genotype-Phenotype Relationships

1 OMIM entry

Amyotrophic lateral sclerosis 6, with or without frontotemporal dementia

MIM #608030

Molecular basis of disorder known

Essential tremor, hereditary, 4

MIM #614782

Molecular basis of disorder known

Autosomal dominant
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GeneReview available — FUS
Authoritative clinical overview · NCBI Bookshelf · Recommended first read
Open GeneReview ↗
Clinical Literature
Landmark / reviewRecent case evidence
Key Publications
Landmark & review papers · by relevance
PubMed
Frontotemporal Dementia.
Clark DG·Continuum (Minneap Minn)
2024Review
FUS gene mutation in amyotrophic lateral sclerosis: a new case report and systematic review.
Xiao X et al.·Amyotroph Lateral Scler Frontotemporal Degener
2024Case report
Top 10 resultsSearch PubMed ↗