FLVCR2

Chr 14AR

FLVCR choline and putative heme transporter 2

Also known as: C14orf58, CCT, EPV, FLVCRL14q, MFSD7C, PVHH, SLC49A2, SLC49A5

This gene encodes a member of the major facilitator superfamily. The encoded transmembrane protein is a calcium transporter. Unlike the related protein feline leukemia virus subgroup C receptor 1, the protein encoded by this locus does not bind to feline leukemia virus subgroup C envelope protein. The encoded protein may play a role in development of brain vascular endothelial cells, as mutations at this locus have been associated with proliferative vasculopathy and hydranencephaly-hydrocephaly syndrome. Alternatively spliced transcript variants have been described.[provided by RefSeq, Aug 2010]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Proliferative vasculopathy and hydranencephaly-hydrocephaly syndromeMIM #225790
AR

Clinical highlights

Gene-disease validity (ClinGen)
Fowler syndrome · ARDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype), though the gene is not strongly LoF-constrained in the population — weigh truncating variants against that tolerance.Curated gene-level mechanism — a prior for triage, not a per-variant call.
1
Active trials
11
Pubs (1 yr)
P/LP submissions
P/LP missense
0.93
LOEUF
LOF
Mechanism· G2P

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
0.93LOEUF
pLI 0.000
Z-score 1.82
OE 0.57 (0.370.93)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?
0.06Z-score
OE missense 0.99 (0.901.09)
293 obs / 296.1 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.57 (0.370.93)
00.351.4
Missense OE?0.99 (0.901.09)
00.61.4
Synonymous OE?1.01
01.21.6
LoF obs/exp: 12 / 21.0Missense obs/exp: 293 / 296.1Syn Z: -0.05

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

FLVCR2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.