FANCB

Chr X

FA complementation group B

Also known as: FA2, FAAP90, FAAP95, FAB, FACB

This gene encodes a member of the Fanconi anemia complementation group B. This protein is assembled into a nucleoprotein complex that is involved in the repair of DNA lesions. Mutations in this gene can cause chromosome instability and VACTERL syndrome with hydrocephalus. [provided by RefSeq, Apr 2016]

GeneReviewsResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

UniProtFanconi anemia complementation group B

Clinical highlights

Gene-disease validity (ClinGen)
Fanconi anemia complementation group B · XLDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype) and the gene is intolerant of it in the population — truncating, frameshift and canonical splice variants carry more prior weight here than missense.Curated gene-level mechanism — a prior for triage, not a per-variant call.
1
Active trials
7
Pubs (1 yr)
P/LP submissions
P/LP missense
0.23
LOEUF· LoF intol.
LOF
Mechanism· G2P
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GeneReview available — FANCB
Authoritative clinical overview · Recommended first read
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Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

LoF intolerant — likely haploinsufficient
LoF Constraint?
0.23LOEUF
pLI 0.996
Z-score 4.04
OE 0.05 (0.020.23)
Highly constrained

Highly LoF-intolerant (top ~10% of genes)

Missense Constraint?
-0.04Z-score
OE missense 1.01 (0.921.11)
294 obs / 292.0 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?0.05 (0.020.23)
00.351.4
Missense OE?1.01 (0.921.11)
00.61.4
Synonymous OE?0.95
01.21.6
LoF obs/exp: 1 / 20.9Missense obs/exp: 294 / 292.0Syn Z: 0.43

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

FANCB · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.