F10

Chr 13AR

coagulation factor X

Also known as: FX, FXA

This gene encodes the vitamin K-dependent coagulation factor X of the blood coagulation cascade. This factor undergoes multiple processing steps before its preproprotein is converted to a mature two-chain form by the excision of the tripeptide RKR. Two chains of the factor are held together by 1 or more disulfide bonds; the light chain contains 2 EGF-like domains, while the heavy chain contains the catalytic domain which is structurally homologous to those of the other hemostatic serine proteases. The mature factor is activated by the cleavage of the activation peptide by factor IXa (in the intrisic pathway), or by factor VIIa (in the extrinsic pathway). The activated factor then converts prothrombin to thrombin in the presence of factor Va, Ca+2, and phospholipid during blood clotting. Mutations of this gene result in factor X deficiency, a hemorrhagic condition of variable severity. Alternative splicing results in multiple transcript variants encoding different isoforms that may undergo similar proteolytic processing to generate mature polypeptides. [provided by RefSeq, Aug 2015]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Factor X deficiencyMIM #227600
AR

Clinical highlights

Gene-disease validity (ClinGen)
congenital factor X deficiency · ARDefinitivesufficient evidence for diagnostic panels
0
Active trials
453
Pubs (1 yr)
P/LP submissions
P/LP missense
0.97
LOEUF
Multiple*
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
0.97LOEUF
pLI 0.000
Z-score 1.67
OE 0.60 (0.380.97)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?
1.20Z-score
OE missense 0.81 (0.730.90)
245 obs / 303.7 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.60 (0.380.97)
00.351.4
Missense OE?0.81 (0.730.90)
00.61.4
Synonymous OE?0.95
01.21.6
LoF obs/exp: 12 / 20.0Missense obs/exp: 245 / 303.7Syn Z: 0.46

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

F10 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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