EVC2

Chr 4ARAD

EvC ciliary complex subunit 2

Also known as: LBN, WAD

This gene encodes a protein that functions in bone formation and skeletal development. Mutations in this gene, as well as in a neighboring gene that lies in a head-to-head configuration, cause Ellis-van Creveld syndrome, an autosomal recessive skeletal dysplasia that is also known as chondroectodermal dysplasia. Mutations in this gene also cause acrofacial dysostosis Weyers type, also referred to as Curry-Hall syndrome, a disease that combines limb and facial abnormalities. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2009]

GeneReviewsOMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Ellis-van Creveld syndromeMIM #225500
AR
Weyers acrofacial dysostosisMIM #193530
AD

Clinical highlights

Gene-disease validity (ClinGen)
acrofacial dysostosis, Weyers type · ADDefinitivesufficient evidence for diagnostic panels2 gene-disease associations curated in total
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype), though the gene is not strongly LoF-constrained in the population — weigh truncating variants against that tolerance.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
20
Pubs (1 yr)
P/LP submissions
P/LP missense
1.06
LOEUF
LOF
Mechanism· G2P
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GeneReview available — EVC2
Authoritative clinical overview · Recommended first read
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Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.06LOEUF
pLI 0.000
Z-score 1.11
OE 0.86 (0.691.06)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
-2.14Z-score
OE missense 1.23 (1.161.30)
847 obs / 688.8 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?0.86 (0.691.06)
00.351.4
Missense OE?1.23 (1.161.30)
00.61.4
Synonymous OE?1.28
01.21.6
LoF obs/exp: 58 / 67.8Missense obs/exp: 847 / 688.8Syn Z: -3.69

ClinVar

No ClinVar data available.

Protein Context — Lollipop Plot

EVC2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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