ERLIN1

Chr 10

ER lipid raft associated 1

Also known as: C10orf69, Erlin-1, KE04, KEO4, SPFH1, SPG62

The protein encoded by this gene is part of a protein complex that mediates degradation of inositol 1,4,5-trisphosphate receptors in the endoplasmic reticulum. The encoded protein also binds cholesterol and regulates the SREBP signaling pathway, which promotes cellular cholesterol homeostasis. Defects in this gene have been associated with spastic paraplegia 62. [provided by RefSeq, Dec 2016]

ResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

UniProtSpastic paraplegia 62, autosomal recessive

Clinical highlights

Gene-disease validity (ClinGen)
hereditary spastic paraplegia 62 · ARDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
9
Pubs (1 yr)
P/LP submissions
P/LP missense
0.54
LOEUF
Multiple*
Mechanism· predicted
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.54LOEUF
pLI 0.178
Z-score 3.04
OE 0.26 (0.130.54)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
1.79Z-score
OE missense 0.63 (0.540.73)
115 obs / 183.1 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.26 (0.130.54)
00.351.4
Missense OE?0.63 (0.540.73)
00.61.4
Synonymous OE?0.96
01.21.6
LoF obs/exp: 5 / 19.5Missense obs/exp: 115 / 183.1Syn Z: 0.24

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

ERLIN1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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