EPG5

Chr 18AR

ectopic P-granules 5 autophagy tethering factor

Also known as: HEEW1, KIAA1632, NEDPAM, VICIS

This gene encodes a protein that functions in autophagy and plays a key role in immune responses by facilitating the translocation of pathogen-derived CpG dinucleotides to lysosomes where TLR9 is located. Mutations cause Vici syndrome and neurodevelopmental disorder with parkinsonism or other movement abnormalities, both inherited in an autosomal recessive pattern. The gene is highly constrained against loss-of-function variants, indicating its critical importance for normal cellular function.

GeneReviewsOMIMResearchSummary from RefSeq, OMIM, UniProt
LOFmechanismARLOEUF 0.462 OMIM phenotypes
Clinical SummaryEPG5
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Gene-Disease Validity (ClinGen)
Vici syndrome · ARDefinitive

Definitive — sufficient evidence for diagnostic panels

Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
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GeneReview available — EPG5
Authoritative clinical overview · Recommended first read
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Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint
0.46LOEUF
pLI 0.000
Z-score 6.88
OE 0.36 (0.280.46)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint
1.08Z-score
OE missense 0.92 (0.870.96)
1233 obs / 1344.4 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.36 (0.280.46)
00.351.4
Missense OE0.92 (0.870.96)
00.61.4
Synonymous OE1.05
01.21.6
LoF obs/exp: 48 / 134.0Missense obs/exp: 1233 / 1344.4Syn Z: -0.95

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

EPG5 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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