EMP2

Chr 16AR

epithelial membrane protein 2

Also known as: XMP

This gene encodes a tetraspan protein of the PMP22/EMP family. The encoded protein regulates cell membrane composition. It has been associated with various functions including endocytosis, cell signaling, cell proliferation, cell migration, cell adhesion, cell death, cholesterol homeostasis, urinary albumin excretion, and embryo implantation. It is known to negatively regulate caveolin-1, a scaffolding protein which is the main component of the caveolae plasma membrane invaginations found in most cell types. Through activation of PTK2 it positively regulates vascular endothelial growth factor A. It also modulates the function of specific integrin isomers in the plasma membrane. Up-regulation of this gene has been linked to cancer progression in multiple different tissues. Mutations in this gene have been associated with nephrotic syndrome type 10 (NPHS10). [provided by RefSeq, Mar 2015]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Nephrotic syndrome, type 10MIM #615861
AR
0
Active trials
18
Pubs (1 yr)
P/LP submissions
P/LP missense
1.88
LOEUF
Multiple*
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.88LOEUF
pLI 0.000
Z-score -0.70
OE 1.29 (0.761.88)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
-0.44Z-score
OE missense 1.12 (0.961.31)
118 obs / 105.3 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?1.29 (0.761.88)
00.351.4
Missense OE?1.12 (0.961.31)
00.61.4
Synonymous OE?1.03
01.21.6
LoF obs/exp: 9 / 7.0Missense obs/exp: 118 / 105.3Syn Z: -0.14

ClinVar

No ClinVar data available.

Protein Context — Lollipop Plot

EMP2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →