ELP4

Chr 11AD

elongator acetyltransferase complex subunit 4

Also known as: AN, AN2, C11orf19, PAX6NEB, PAXNEB, dJ68P15A.1, hELP4

This gene encodes a component of the six subunit elongator complex, a histone acetyltransferase complex that associates directly with RNA polymerase II during transcriptional elongation. The human gene can partially complement sensitivity phenotypes of yeast ELP4 deletion mutants. This gene has also been associated with Rolandic epilepsy. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2013]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

?Aniridia 2MIM #617141
AD

Clinical highlights

Gene-disease validity (ClinGen)
ocular dysgenesis caused by defects in PAX6 regulation · ADModerateconsider for supplementary testing
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype), though the gene is not strongly LoF-constrained in the population — weigh truncating variants against that tolerance.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
5
Pubs (1 yr)
P/LP submissions
P/LP missense
1.03
LOEUF
LOF
Mechanism· G2P

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.03LOEUF
pLI 0.000
Z-score 1.46
OE 0.66 (0.431.03)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
-0.30Z-score
OE missense 1.06 (0.951.18)
242 obs / 229.2 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?0.66 (0.431.03)
00.351.4
Missense OE?1.06 (0.951.18)
00.61.4
Synonymous OE?1.06
01.21.6
LoF obs/exp: 14 / 21.3Missense obs/exp: 242 / 229.2Syn Z: -0.46

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

ELP4 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →