ELOVL4

Chr 6ARAD

ELOVL fatty acid elongase 4

Also known as: ADMD, CT118, ISQMR, SCA34, STGD2, STGD3

This gene encodes a membrane-bound protein which is a member of the ELO family, proteins which participate in the biosynthesis of fatty acids. Consistent with the expression of the encoded protein in photoreceptor cells of the retina, mutations and small deletions in this gene are associated with Stargardt-like macular dystrophy (STGD3) and autosomal dominant Stargardt-like macular dystrophy (ADMD), also referred to as autosomal dominant atrophic macular degeneration. [provided by RefSeq, Jul 2008]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Ichthyosis, spastic quadriplegia, and impaired intellectual developmentMIM #614457
AR
Spinocerebellar ataxia 34MIM #133190
AD
Stargardt disease 3MIM #600110
AD

Clinical highlights

Gene-disease validity (ClinGen)
ELOVL4-related maculopathy · ADDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype) and the gene is intolerant of it in the population — truncating, frameshift and canonical splice variants carry more prior weight here than missense.Curated gene-level mechanism — a prior for triage, not a per-variant call.
1
Active trials
31
Pubs (1 yr)
P/LP submissions
P/LP missense
0.41
LOEUF
LOF
Mechanism· G2P

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.41LOEUF
pLI 0.832
Z-score 3.41
OE 0.16 (0.070.41)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
1.19Z-score
OE missense 0.74 (0.640.86)
126 obs / 169.4 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.16 (0.070.41)
00.351.4
Missense OE?0.74 (0.640.86)
00.61.4
Synonymous OE?1.05
01.21.6
LoF obs/exp: 3 / 19.1Missense obs/exp: 126 / 169.4Syn Z: -0.28

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

ELOVL4 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.