EIF4E1B

Chr 5

eukaryotic translation initiation factor 4E family member 1B

The protein recognizes and binds the 7-methylguanosine mRNA cap and facilitates ribosome binding by unwinding mRNA secondary structures during protein synthesis initiation. Mutations in this gene have not yet been definitively associated with human disease. The gene shows tolerance to loss-of-function variants (LOEUF 1.303), suggesting it may not be essential for normal development.

Summary from RefSeq, UniProt
Research Assistant →
0
Active trials
2
Pubs (1 yr)
51
P/LP submissions
0%
P/LP missense
1.30
LOEUF
DN
Mechanism· predicted
Clinical SummaryEIF4E1B
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
📋
ClinVar Variants
50 unique Pathogenic / Likely Pathogenic· 41 VUS of 97 total submissions

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.30LOEUF
pLI 0.000
Z-score 0.74
OE 0.79 (0.491.30)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
0.62Z-score
OE missense 0.85 (0.730.99)
115 obs / 135.3 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.79 (0.491.30)
00.351.4
Missense OE0.85 (0.730.99)
00.61.4
Synonymous OE0.93
01.21.6
LoF obs/exp: 11 / 14.0Missense obs/exp: 115 / 135.3Syn Z: 0.39
DN
0.6455th %ile
GOF
0.5954th %ile
LOF
0.3357th %ile

The highest-scoring mechanism for this gene is dominant-negative.

DNprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

97 submitted variants in ClinVar

Classification Summary

Pathogenic48
Likely Pathogenic2
VUS41
Likely Benign5
48
Pathogenic
2
Likely Pathogenic
41
VUS
5
Likely Benign

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
0
0
48
0
48
Likely Pathogenic
0
0
2
0
2
VUS
0
34
7
0
41
Likely Benign
0
3
1
1
5
Benign
0
0
0
0
0
Total03758196

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

EIF4E1B · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →
Clinical Literature
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Key Publications
Landmark & review papers · by relevance
PubMed
Top 5 results · since 2015Search PubMed ↗
Recent Gene-Specific Literature
Gene in title · MEDLINE · newest first
Europe PMC