DSPP

Chr 4AD

dentin sialophosphoprotein

Also known as: DFNA39, DGI1, DMP3, DPP, DSP

This gene encodes a member of the small integrin-binding ligand N-linked glycoprotein (SIBLING) family of proteins. The encoded preproprotein is secreted by odontoblasts and proteolytically processed to generate two principal proteins of the dentin extracellular matrix of the tooth, dentin sialoprotein and dentin phosphoprotein. These two protein products may play distinct but related roles in dentin mineralization. Mutations in this gene are associated with dentinogenesis imperfecta and dentin dysplasia. This gene is present in a gene cluster on chromosome 4. Allelic differences due to repeat polymorphisms have been found for this gene. [provided by RefSeq, Jan 2016]

GeneReviewsOMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Deafness, autosomal dominant 39, with dentinogenesisMIM #605594
AD
Dentin dysplasia, type IIMIM #125420
AD
Dentinogenesis imperfecta, Shields type IIMIM #125490
AD
Dentinogenesis imperfecta, Shields type IIIMIM #125500
AD
UniProtDentin dysplasia 2

Clinical highlights

Gene-disease validity (ClinGen)
dentinogenesis imperfecta · ADDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype), though the gene is not strongly LoF-constrained in the population — weigh truncating variants against that tolerance.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
174
Pubs (1 yr)
P/LP submissions
P/LP missense
1.17
LOEUF
LOF*
Mechanism· G2P
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GeneReview available — DSPP
Authoritative clinical overview · Recommended first read
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Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.17LOEUF
pLI 0.000
Z-score 1.02
OE 0.74 (0.481.17)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
1.10Z-score
OE missense 0.88 (0.820.94)
596 obs / 676.8 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.74 (0.481.17)
00.351.4
Missense OE?0.88 (0.820.94)
00.61.4
Synonymous OE?1.32
01.21.6
LoF obs/exp: 13 / 17.6Missense obs/exp: 596 / 676.8Syn Z: -3.74

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

DSPP · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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