DSG1

Chr 18

desmoglein 1

Also known as: CDHF4, DG1, DSG, EPKHE, EPKHIA, PPKS1, SPPK1

This gene encodes a member of the desmoglein protein subfamily. Desmogleins, along with desmocollins, are cadherin-like transmembrane glycoproteins that are major components of the desmosome. Desmosomes are cell-cell junctions that help resist shearing forces and are found in high concentrations in cells subject to mechanical stress. This gene is found in a cluster with other desmoglein family members on chromosome 18. The encoded protein has been identified as a target of auto-antibodies in the autoimmune skin blistering disease pemphigus foliaceus. Disruption of this gene has also been associated with the skin diseases palmoplantar keratoderma and erythroderma. [provided by RefSeq, Feb 2015]

ResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

UniProtPalmoplantar keratoderma 1, striate, focal, or diffuse
UniProtErythroderma, congenital, with palmoplantar keratoderma, hypotrichosis, and hyper IgE

Clinical highlights

Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype) and the gene is intolerant of it in the population — truncating, frameshift and canonical splice variants carry more prior weight here than missense.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
84
Pubs (1 yr)
P/LP submissions
P/LP missense
0.33
LOEUF· LoF intol.
LOF
Mechanism· G2P
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

LoF intolerant — likely haploinsufficient
LoF Constraint?
0.33LOEUF
pLI 0.927
Z-score 5.00
OE 0.18 (0.110.33)
Highly constrained

Highly LoF-intolerant (top ~10% of genes)

Missense Constraint?
-0.34Z-score
OE missense 1.04 (0.971.11)
592 obs / 569.1 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?0.18 (0.110.33)
00.351.4
Missense OE?1.04 (0.971.11)
00.61.4
Synonymous OE?1.13
01.21.6
LoF obs/exp: 8 / 43.6Missense obs/exp: 592 / 569.1Syn Z: -1.40

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

DSG1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →