DSCAM

Chr 21

DS cell adhesion molecule

Also known as: CHD2, CHD2-42, CHD2-52

This gene is a member of the immunoglobulin superfamily of cell adhesion molecules (Ig-CAMs), and is involved in human central and peripheral nervous system development. This gene is a candidate for Down syndrome and congenital heart disease (DSCHD). A gene encoding a similar Ig-CAM protein is located on chromosome 11. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Oct 2012]

ResearchGenerating clinical summary…

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
1
Active trials
37
Pubs (1 yr)
P/LP submissions
P/LP missense
0.19
LOEUF· LoF intol.
LOF
Mechanism· predicted
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Dual constrained — LoF & missense intolerant
LoF Constraint?
0.19LOEUF
pLI 1.000
Z-score 8.07
OE 0.11 (0.070.19)
Highly constrained

Highly LoF-intolerant (top ~10% of genes)

Missense Constraint?
3.22Z-score
OE missense 0.74 (0.700.78)
889 obs / 1203.6 exp
Constrained

Highly missense-constrained (top ~0.1%)

Observed / Expected Ratios?
LoF OE?0.11 (0.070.19)
00.351.4
Missense OE?0.74 (0.700.78)
00.61.4
Synonymous OE?1.07
01.21.6
LoF obs/exp: 11 / 96.5Missense obs/exp: 889 / 1203.6Syn Z: -1.21

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

DSCAM · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.