DIPK2B

Chr X

divergent protein kinase domain 2B

Also known as: 4930578C19Rik, CXorf36, DIA1R, EPQL1862, PRO3743, bA435K1.1

DIPK2B is predicted to be located in the extracellular region, though its specific protein function remains unclear. The gene shows low constraint against loss-of-function variants (LOEUF 1.355), suggesting tolerance to such changes. Currently, no well-established human diseases have been definitively linked to DIPK2B mutations.

OMIMResearchSummary from RefSeq
LOEUF 1.35
Clinical SummaryDIPK2B
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
📋
ClinVar Variants
55 unique Pathogenic / Likely Pathogenic· 17 VUS of 113 total submissions

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.35LOEUF
pLI 0.000
Z-score 0.75
OE 0.75 (0.441.35)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
0.54Z-score
OE missense 0.89 (0.781.01)
160 obs / 180.4 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.75 (0.441.35)
00.351.4
Missense OE0.89 (0.781.01)
00.61.4
Synonymous OE1.04
01.21.6
LoF obs/exp: 8 / 10.6Missense obs/exp: 160 / 180.4Syn Z: -0.26

ClinVar Variant Classifications

113 submitted variants in ClinVar

Classification Summary

Pathogenic52
Likely Pathogenic3
VUS17
Likely Benign8
Benign6
52
Pathogenic
3
Likely Pathogenic
17
VUS
8
Likely Benign
6
Benign

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
0
0
52
0
52
Likely Pathogenic
0
0
3
0
3
VUS
0
2
15
0
17
Likely Benign
0
1
2
5
8
Benign
0
5
0
1
6
Total0872686

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

DIPK2B · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →
Clinical Literature
Open Research Assistant →
Key Publications
Landmark & review papers · by relevance
PubMed
Genetic Determinants of Atherogenic Indexes.
Texis T et al.·Genes (Basel)
2023
Top 1 results · since 2015Search PubMed ↗
Recent Gene-Specific Literature
Gene in title · MEDLINE · newest first
Europe PMC

No open access results found