DHDDS

Chr 1

dehydrodolichyl diphosphate synthase subunit

Also known as: CIT, CPT, DEDSM, DS, HDS, RP59, hCIT

The protein encoded by this gene catalyzes cis-prenyl chain elongation to produce the polyprenyl backbone of dolichol, a glycosyl carrier lipid required for the biosynthesis of several classes of glycoproteins. Mutations in this gene are associated with retinitis pigmentosa type 59. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Aug 2011]

ResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

UniProtRetinitis pigmentosa 59
UniProtDevelopmental delay and seizures with or without movement abnormalities
UniProtCongenital disorder of glycosylation 1BB

Clinical highlights

Gene-disease validity (ClinGen)
DHDDS-CDG · ARDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Curated gene-level mechanism — a prior for triage, not a per-variant call.
1
Active trials
10
Pubs (1 yr)
P/LP submissions
P/LP missense
0.51
LOEUF
DN
Mechanism· predicted
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.51LOEUF
pLI 0.245
Z-score 3.18
OE 0.24 (0.130.51)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
1.09Z-score
OE missense 0.78 (0.680.89)
152 obs / 194.8 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.24 (0.130.51)
00.351.4
Missense OE?0.78 (0.680.89)
00.61.4
Synonymous OE?0.86
01.21.6
LoF obs/exp: 5 / 20.6Missense obs/exp: 152 / 194.8Syn Z: 0.97

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

DHDDS · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.