DGAT1

Chr 8

diacylglycerol O-acyltransferase 1

Also known as: ARAT, ARGP1, DGAT, DIAR7

The protein catalyzes the terminal step in triacylglycerol synthesis and is highly expressed in small intestinal epithelial cells where it is essential for dietary fat absorption. Mutations cause autosomal recessive diarrhea 7 with protein-losing enteropathy. The gene is not highly constrained against loss-of-function variants, consistent with the recessive inheritance pattern.

GeneReviewsResearchSummary from RefSeq, OMIM, UniProt
LOFmechanismLOEUF 1.22
Clinical SummaryDGAT1
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
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ClinVar Variants
49 unique Pathogenic / Likely Pathogenic· 58 VUS of 400 total submissions
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Clinical Trials
1 active or recruiting trial — potential therapeutic options may be available
📖
GeneReview available — DGAT1
Authoritative clinical overview · Recommended first read
Open GeneReview ↗
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.22LOEUF
pLI 0.000
Z-score 0.58
OE 0.89 (0.661.22)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
1.04Z-score
OE missense 0.82 (0.740.92)
229 obs / 277.9 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.89 (0.661.22)
00.351.4
Missense OE0.82 (0.740.92)
00.61.4
Synonymous OE1.13
01.21.6
LoF obs/exp: 28 / 31.5Missense obs/exp: 229 / 277.9Syn Z: -1.11
Curated Mechanism (G2P)Gene2Phenotype (DDG2P) ↗
limitedDGAT1-related congenital diarrheal disorderLOFAR

Predictions shown for reference only — model trained on dominant genes, not applicable to AR conditions.

DN
0.6842th %ile
GOF
0.7029th %ile
LOF
0.3550th %ile

The Badonyi & Marsh prediction model was trained exclusively on dominant disease genes. Predictions are not reliable for genes with autosomal recessive inheritance and are shown at reduced opacity for reference only.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

400 submitted variants in ClinVar

Classification Summary

Pathogenic28
Likely Pathogenic21
VUS58
Likely Benign271
Benign3
Conflicting1
28
Pathogenic
21
Likely Pathogenic
58
VUS
271
Likely Benign
3
Benign
1
Conflicting

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
23
0
5
0
28
Likely Pathogenic
18
1
2
0
21
VUS
2
50
6
0
58
Likely Benign
0
1
156
114
271
Benign
0
0
3
0
3
Conflicting
1
Total4352172114382

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

DGAT1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold
Clinical Literature
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