DENND4C

Chr 9

DENN domain containing 4C

Also known as: C9orf55, C9orf55B, RAB10GEF, bA513M16.3

Enables guanyl-nucleotide exchange factor activity. Predicted to be involved in cellular response to insulin stimulus; protein localization to plasma membrane; and regulation of Rab protein signal transduction. Located in Golgi apparatus and cytosol. [provided by Alliance of Genome Resources, Jul 2025]

ResearchGenerating clinical summary…

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
3
Pubs (1 yr)
P/LP submissions
P/LP missense
0.45
LOEUF
DN
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.45LOEUF
pLI 0.000
Z-score 5.60
OE 0.32 (0.230.45)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
-0.65Z-score
OE missense 1.06 (1.001.12)
926 obs / 872.2 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?0.32 (0.230.45)
00.351.4
Missense OE?1.06 (1.001.12)
00.61.4
Synonymous OE?1.14
01.21.6
LoF obs/exp: 25 / 78.5Missense obs/exp: 926 / 872.2Syn Z: -1.98

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

DENND4C · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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