DEFB1

Chr 8

defensin beta 1

Also known as: BD1, DEFB-1, DEFB101, HBD1

Defensins form a family of microbicidal and cytotoxic peptides made by neutrophils. Members of the defensin family are highly similar in protein sequence. This gene encodes defensin, beta 1, an antimicrobial peptide implicated in the resistance of epithelial surfaces to microbial colonization. This gene maps in close proximity to defensin family member, defensin, alpha 1 and has been implicated in the pathogenesis of cystic fibrosis. [provided by RefSeq, Jul 2008]

GeneReviewsOMIMResearchGenerating clinical summary…

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
1
Active trials
33
Pubs (1 yr)
P/LP submissions
P/LP missense
1.69
LOEUF
DN
Mechanism· predicted
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GeneReview available — DEFB1
Authoritative clinical overview · Recommended first read
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Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.69LOEUF
pLI 0.406
Z-score 0.98
OE 0.00 (0.001.69)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
-2.99Z-score
OE missense 2.44 (1.751.99)
83 obs / 34.0 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?0.00 (0.001.69)
00.351.4
Missense OE?2.44 (1.751.99)
00.61.4
Synonymous OE?2.13
01.21.6
LoF obs/exp: 0 / 1.1Missense obs/exp: 83 / 34.0Syn Z: -3.22

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

DEFB1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.