DEFA6

Chr 8

defensin alpha 6

Also known as: DEF6, HD-6

Defensins are a family of antimicrobial and cytotoxic peptides thought to be involved in host defense. They are abundant in the granules of neutrophils and also found in the epithelia of mucosal surfaces such as those of the intestine, respiratory tract, urinary tract, and vagina. Members of the defensin family are highly similar in protein sequence and distinguished by a conserved cysteine motif. Several alpha defensin genes appear to be clustered on chromosome 8. The protein encoded by this gene, defensin, alpha 6, is highly expressed in the secretory granules of Paneth cells of the small intestine, and likely plays a role in host defense of human bowel. [provided by RefSeq, Oct 2014]

ResearchGenerating clinical summary…
0
Active trials
7
Pubs (1 yr)
P/LP submissions
P/LP missense
1.97
LOEUF
DN
Mechanism· predicted
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.97LOEUF
pLI 0.000
Z-score -2.41
OE 2.77 (1.011.97)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
-1.86Z-score
OE missense 1.73 (1.451.95)
89 obs / 51.5 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?2.77 (1.011.97)
00.351.4
Missense OE?1.73 (1.451.95)
00.61.4
Synonymous OE?1.87
01.21.6
LoF obs/exp: 6 / 2.2Missense obs/exp: 89 / 51.5Syn Z: -3.08

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

DEFA6 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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