DDX19B

Chr 16

DEAD-box helicase 19B

Also known as: DBP5, DDX19, RNAh

The protein is an ATP-dependent RNA helicase that remodels ribonucleoprotein particles during mRNA export from the nucleus, dissociating nuclear mRNA-binding proteins and facilitating their replacement with cytoplasmic mRNA-binding proteins. Mutations in DDX19B cause autosomal dominant neurodevelopmental disorders through a dominant-negative mechanism. The gene shows high tolerance to loss-of-function variants (pLI near zero), consistent with dominant-negative pathogenicity rather than haploinsufficiency.

Summary from RefSeq, UniProt, Mechanism
0
Active trials
2
Pubs (1 yr)
0
P/LP submissions
P/LP missense
0.89
LOEUF
DN
Mechanism· predicted
Clinical SummaryDDX19B
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
0.89LOEUF
pLI 0.000
Z-score 1.98
OE 0.58 (0.390.89)
Tolerant

Typical tolerance to LoF variation

Missense Constraint
2.22Z-score
OE missense 0.62 (0.550.70)
168 obs / 271.0 exp
Mild constraint

Moderately missense-constrained (top ~2.5%)

Observed / Expected Ratios
LoF OE0.58 (0.390.89)
00.351.4
Missense OE0.62 (0.550.70)
00.61.4
Synonymous OE0.91
01.21.6
LoF obs/exp: 15 / 25.9Missense obs/exp: 168 / 271.0Syn Z: 0.71
DN
0.83top 10%
GOF
0.6346th %ile
LOF
0.2387th %ile

The highest-scoring mechanism for this gene is dominant-negative.

DNprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

DDX19B · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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Recent Gene-Specific Literature
Gene in title · MEDLINE · newest first
Europe PMC