DCP1B

Chr 12

decapping mRNA 1B

Also known as: DCP1

The protein removes the 5'-methyl guanine cap from mRNA molecules as part of regulated mRNA degradation and nonsense-mediated decay pathways. Mutations cause neurodevelopmental disorder with epilepsy, cataracts, feeding difficulties, and delayed puberty, inherited in an autosomal recessive pattern. This gene shows very low constraint against loss-of-function variants in the general population.

Summary from RefSeq, UniProt
Research Assistant →
0
Active trials
3
Pubs (1 yr)
0
P/LP submissions
P/LP missense
1.05
LOEUF
DN
Mechanism· predicted
Clinical SummaryDCP1B
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.05LOEUF
pLI 0.000
Z-score 1.34
OE 0.72 (0.501.05)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
0.53Z-score
OE missense 0.92 (0.841.01)
308 obs / 335.4 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.72 (0.501.05)
00.351.4
Missense OE0.92 (0.841.01)
00.61.4
Synonymous OE1.03
01.21.6
LoF obs/exp: 19 / 26.4Missense obs/exp: 308 / 335.4Syn Z: -0.27
DN
0.6453th %ile
GOF
0.4578th %ile
LOF
0.3940th %ile

The highest-scoring mechanism for this gene is dominant-negative.

DNprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

DCP1B · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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Key Publications
Landmark & review papers · by relevance
PubMed
Top 1 results · since 2015Search PubMed ↗
Recent Gene-Specific Literature
Gene in title · MEDLINE · newest first
Europe PMC