CXCL5

Chr 4

C-X-C motif chemokine ligand 5

Also known as: ENA-78, SCYB5

This gene encodes a protein that is a member of the CXC subfamily of chemokines. Chemokines, which recruit and activate leukocytes, are classified by function (inflammatory or homeostatic) or by structure. This protein is proposed to bind the G-protein coupled receptor chemokine (C-X-C motif) receptor 2 to recruit neutrophils, to promote angiogenesis and to remodel connective tissues. This protein is thought to play a role in cancer cell proliferation, migration, and invasion. [provided by RefSeq, May 2013]

ResearchGenerating clinical summary…
1
Active trials
291
Pubs (1 yr)
P/LP submissions
P/LP missense
1.91
LOEUF
DN
Mechanism· predicted
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.91LOEUF
pLI 0.000
Z-score -0.78
OE 1.37 (0.741.91)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
-0.12Z-score
OE missense 1.04 (0.851.28)
65 obs / 62.2 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?1.37 (0.741.91)
00.351.4
Missense OE?1.04 (0.851.28)
00.61.4
Synonymous OE?1.15
01.21.6
LoF obs/exp: 7 / 5.1Missense obs/exp: 65 / 62.2Syn Z: -0.62

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

CXCL5 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.