CWC27

Chr 5AR

CWC27 spliceosome associated cyclophilin

Also known as: NY-CO-10, RPSKA, SDCCAG-10, SDCCAG10

Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in protein folding. Located in nucleoplasm. Part of U2-type precatalytic spliceosome and catalytic step 2 spliceosome. [provided by Alliance of Genome Resources, Jul 2025]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Retinitis pigmentosa with or without skeletal anomaliesMIM #250410
AR

Clinical highlights

Gene-disease validity (ClinGen)
metaphyseal chondrodysplasia-retinitis pigmentosa syndrome · ARDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype), though the gene is not strongly LoF-constrained in the population — weigh truncating variants against that tolerance.Curated gene-level mechanism — a prior for triage, not a per-variant call.
1
Active trials
3
Pubs (1 yr)
P/LP submissions
P/LP missense
0.90
LOEUF
LOF
Mechanism· G2P

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
0.90LOEUF
pLI 0.000
Z-score 1.94
OE 0.57 (0.380.90)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?
0.76Z-score
OE missense 0.86 (0.760.97)
193 obs / 225.2 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.57 (0.380.90)
00.351.4
Missense OE?0.86 (0.760.97)
00.61.4
Synonymous OE?0.79
01.21.6
LoF obs/exp: 14 / 24.4Missense obs/exp: 193 / 225.2Syn Z: 1.41

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

CWC27 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.