CTU2

Chr 16AR

cytosolic thiouridylase subunit 2

Also known as: C16orf84, MFRG, NCS2, UPF0432

This gene encodes a protein which is involved in the post-transcriptional modification of transfer RNAs (tRNAs). The encoded protein plays a role in thiolation of uridine residue present at the wobble position in a subset of tRNAs, resulting in enhanced codon reading accuracy. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jan 2016]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Microcephaly, facial dysmorphism, renal agenesis, and ambiguous genitalia syndromeMIM #618142
AR

Clinical highlights

Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype), though the gene is not strongly LoF-constrained in the population — weigh truncating variants against that tolerance.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
5
Pubs (1 yr)
P/LP submissions
P/LP missense
1.50
LOEUF
LOF
Mechanism· G2P

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.50LOEUF
pLI 0.000
Z-score -0.53
OE 1.11 (0.831.50)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
-3.95Z-score
OE missense 1.62 (1.511.75)
514 obs / 316.4 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?1.11 (0.831.50)
00.351.4
Missense OE?1.62 (1.511.75)
00.61.4
Synonymous OE?1.79
01.21.6
LoF obs/exp: 31 / 28.0Missense obs/exp: 514 / 316.4Syn Z: -7.23

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

CTU2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →