CSMD1

Chr 8

CUB and Sushi multiple domains 1

Also known as: PPP1R24

Predicted to act upstream of or within several processes, including learning or memory; mammary gland branching involved in pregnancy; and reproductive structure development. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Jul 2025]

OMIMResearchGenerating clinical summary…

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
38
Pubs (1 yr)
P/LP submissions
P/LP missense
0.21
LOEUF· LoF intol.
Mechanism

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

LoF intolerant — likely haploinsufficient
LoF Constraint?
0.21LOEUF
pLI 1.000
Z-score 10.44
OE 0.15 (0.110.21)
Highly constrained

Highly LoF-intolerant (top ~10% of genes)

Missense Constraint?
-6.87Z-score
OE missense 1.44 (1.391.49)
2787 obs / 1936.4 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?0.15 (0.110.21)
00.351.4
Missense OE?1.44 (1.391.49)
00.61.4
Synonymous OE?1.74
01.21.6
LoF obs/exp: 27 / 176.8Missense obs/exp: 2787 / 1936.4Syn Z: -16.49

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

CSMD1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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