CRIPT

Chr 2AR

CXXC repeat containing interactor of PDZ3 domain

Also known as: HSPC139, RTS3, SSMDF

This gene encodes a protein that binds to the PDZ3 peptide recognition domain. The encoded protein may modulates protein interactions with the cytoskeleton. A mutation in this gene resulted in short stature with microcephaly and distinctive facies. [provided by RefSeq, Jun 2014]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Rothmund-Thomson syndrome, type 3MIM #615789
AR
0
Active trials
5
Pubs (1 yr)
P/LP submissions
P/LP missense
1.58
LOEUF
Multiple*
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.58LOEUF
pLI 0.001
Z-score 0.52
OE 0.78 (0.411.58)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
-0.39Z-score
OE missense 1.16 (0.941.44)
57 obs / 49.2 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?0.78 (0.411.58)
00.351.4
Missense OE?1.16 (0.941.44)
00.61.4
Synonymous OE?0.87
01.21.6
LoF obs/exp: 5 / 6.4Missense obs/exp: 57 / 49.2Syn Z: 0.40

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

CRIPT · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →