CPOX

Chr 3ADAR

coproporphyrinogen oxidase

Also known as: COX, CPO, CPX, HARPO, HCP

The protein encoded by this gene is the sixth enzyme of the heme biosynthetic pathway. The encoded enzyme is soluble and found in the intermembrane space of mitochondria. This enzyme catalyzes the stepwise oxidative decarboxylation of coproporphyrinogen III to protoporphyrinogen IX, a precursor of heme. Defects in this gene are a cause of hereditary coproporphyria (HCP).[provided by RefSeq, Oct 2009]

GeneReviewsOMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

CoproporphyriaMIM #121300
ADAR
HarderoporphyriaMIM #618892
AR
UniProtHereditary coproporphyria

Clinical highlights

Gene-disease validity (ClinGen)
CPOX-related hereditary coproporphyria · SDDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
1
Active trials
20
Pubs (1 yr)
P/LP submissions
P/LP missense
0.54
LOEUF
Mechanism
📖
GeneReview available — CPOX
Authoritative clinical overview · Recommended first read
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Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.54LOEUF
pLI 0.172
Z-score 3.03
OE 0.26 (0.130.54)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
1.35Z-score
OE missense 0.75 (0.660.85)
173 obs / 230.6 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.26 (0.130.54)
00.351.4
Missense OE?0.75 (0.660.85)
00.61.4
Synonymous OE?1.08
01.21.6
LoF obs/exp: 5 / 19.4Missense obs/exp: 173 / 230.6Syn Z: -0.58

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

CPOX · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.