CPOX

Chr 3ADAR

coproporphyrinogen oxidase

Also known as: COX, CPO, CPX, HARPO, HCP

The enzyme catalyzes the oxidative decarboxylation of coproporphyrinogen III to protoporphyrinogen IX as the sixth step in heme biosynthesis and is located in the mitochondrial intermembrane space. Mutations cause coproporphyria and harderoporphyria, which are acute hepatic porphyrias that can present with neurological crises, abdominal pain, and psychiatric symptoms. The gene shows both autosomal dominant and autosomal recessive inheritance patterns depending on the specific variant and resulting phenotype severity.

OMIMResearchSummary from RefSeq, OMIM, UniProt
AD/ARLOEUF 0.542 OMIM phenotypes
Clinical SummaryCPOX
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Gene-Disease Validity (ClinGen)
CPOX-related hereditary coproporphyria · SDDefinitive

Definitive — sufficient evidence for diagnostic panels

Population Constraint (gnomAD)
Constrained for loss-of-function variants (OE-LoF 0.26) despite low pLI — interpret in context.
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Clinical Trials
1 active or recruiting trial — potential therapeutic options may be available

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint
0.54LOEUF
pLI 0.172
Z-score 3.03
OE 0.26 (0.130.54)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint
1.35Z-score
OE missense 0.75 (0.660.85)
173 obs / 230.6 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.26 (0.130.54)
00.351.4
Missense OE0.75 (0.660.85)
00.61.4
Synonymous OE1.08
01.21.6
LoF obs/exp: 5 / 19.4Missense obs/exp: 173 / 230.6Syn Z: -0.58

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

CPOX · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold
Clinical Literature
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