CPLANE1

Chr 5AR

ciliogenesis and planar polarity effector complex subunit 1

Involved in ciliogenesis (PubMed:25877302, PubMed:35582950). Involved in the establishment of cell polarity required for directional cell migration. Proposed to act in association with the CPLANE (ciliogenesis and planar polarity effectors) complex. Involved in recruitment of peripheral IFT-A proteins to basal bodies (By similarity)

OMIMResearchGenerating clinical summary…
LOFmechanismARLOEUF 0.672 OMIM phenotypes
Clinical SummaryCPLANE1
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Gene-Disease Validity (ClinGen)
Joubert syndrome 17 · ARDefinitive

Definitive — sufficient evidence for diagnostic panels

Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
Some data sources returned errors (1)

ncbi: Error: NCBI fetch failed: 429 https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esearch.fcgi

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
0.67LOEUF
pLI 0.000
Z-score 4.92
OE 0.56 (0.470.67)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?
1.93Z-score
OE missense 0.86 (0.820.90)
1307 obs / 1518.9 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.56 (0.470.67)
00.351.4
Missense OE?0.86 (0.820.90)
00.61.4
Synonymous OE?0.93
01.21.6
LoF obs/exp: 82 / 146.2Missense obs/exp: 1307 / 1518.9Syn Z: 1.27

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

CPLANE1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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