COL8A2

Chr 1AD

collagen type VIII alpha 2 chain

Macromolecular component of the subendothelium. Major component of the Descemet's membrane (basement membrane) of corneal endothelial cells. Also a component of the endothelia of blood vessels. Necessary for migration and proliferation of vascular smooth muscle cells and thus, has a potential role in the maintenance of vessel wall integrity and structure, in particular in atherogenesis (By similarity)

Primary Disease Associations & Inheritance

Corneal dystrophy, Fuchs endothelial, 1MIM #136800
AD
Corneal dystrophy, posterior polymorphous 2MIM #609140
AD
209
ClinVar variants
0
Pathogenic / LP
0.12
pLI score
0
Active trials
Clinical SummaryCOL8A2
Population Constraint (gnomAD)
Constrained for loss-of-function variants (OE-LoF 0.29) despite low pLI — interpret in context.
📋
ClinVar Variants
209 total variants — no pathogenic classifications of 209 total submissions

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?LOEUF (Loss-of-function Observed/Expected Upper bound Fraction) is the upper bound of the 90% CI for LoF OE — the preferred gnomAD v4 metric. Lower = more intolerant to LoF. LOEUF < 0.35 = highly constrained.
0.66LOEUF
pLI 0.118
Z-score 2.45
OE 0.29 (0.140.66)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?Missense Z-score: standard deviations fewer missense variants observed vs. expected. Z > 3.09 (p < 0.001) = gene does not tolerate missense variation. OE missense < 0.6 is also considered constrained.
1.57Z-score
OE missense 0.78 (0.710.85)
304 obs / 391.3 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?Shaded band = 90% confidence interval. Vertical tick = point estimate. Grey threshold line = gnomAD constraint cutoff for that variant class.
LoF OE?Ratio of observed to expected LoF variants. Upper CI bound (LOEUF) ≤ 0.35 = strong LoF constraint signal.0.29 (0.140.66)
00.351.4
Missense OE?Ratio of observed to expected missense variants. OE ≤ 0.6 = fewer missense variants than expected by chance.0.78 (0.710.85)
00.61.4
Synonymous OE?Control metric — synonymous variants are largely neutral and expected near OE = 1.0. Significant deviation may indicate annotation issues.1.11
01.21.6
LoF obs/exp: 4 / 13.8Missense obs/exp: 304 / 391.3Syn Z: -1.14

ClinVar Variant Classifications

209 submitted variants in ClinVar

Classification Summary

Protein Context — Lollipop Plot

COL8A2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Gene2Phenotype Curations

COL8A2-related corneal dystrophy, Fuchs endothelial

strong
ADUndeterminedAltered Gene Product Structure
Eye
G2P ↗
missense variantinframe deletioninframe insertion

Gene2Phenotype curations · DECIPHER consortium patient cohort (public variants) · deciphergenomics.org

OMIM — Genotype-Phenotype Relationships

1 OMIM entry

Corneal dystrophy, Fuchs endothelial, 1

MIM #136800

Molecular basis of disorder known

Autosomal dominant

Corneal dystrophy, posterior polymorphous 2

MIM #609140

Molecular basis of disorder known

Autosomal dominant

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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