CNTN4

Chr 3

contactin 4

Also known as: AXCAM, BIG-2

This gene encodes a member of the contactin family of immunoglobulins. Contactins are axon-associated cell adhesion molecules that function in neuronal network formation and plasticity. The encoded protein is a glycosylphosphatidylinositol-anchored neuronal membrane protein that may play a role in the formation of axon connections in the developing nervous system. Deletion or mutation of this gene may play a role in 3p deletion syndrome and autism spectrum disorders. Alternative splicing results in multiple transcript variants. [provided by RefSeq, May 2011]

OMIMResearchGenerating clinical summary…

Clinical highlights

Gene-disease validity (ClinGen)
complex neurodevelopmental disorder · ADDisputedevidence questions this relationship
0
Active trials
12
Pubs (1 yr)
P/LP submissions
P/LP missense
0.52
LOEUF
Multiple*
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.52LOEUF
pLI 0.000
Z-score 4.46
OE 0.36 (0.250.52)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
0.57Z-score
OE missense 0.93 (0.871.00)
524 obs / 562.1 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.36 (0.250.52)
00.351.4
Missense OE?0.93 (0.871.00)
00.61.4
Synonymous OE?1.21
01.21.6
LoF obs/exp: 20 / 56.0Missense obs/exp: 524 / 562.1Syn Z: -2.37

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

CNTN4 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →