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CNE-2

Chr X, YARAD

CNE-2 enhancer upstream of SHOX

CNE-2 is a conserved enhancer element that regulates SHOX gene expression through direct promoter interactions. Mutations including deletions and duplications cause Leri-Weill dyschondrosteosis and idiopathic short stature, with additional associations to autism spectrum disorders and neurodevelopmental conditions. The inheritance pattern is pseudoautosomal dominant due to its location in the pseudoautosomal region of the X and Y chromosomes.

OMIMResearchSummary from RefSeq, OMIM
AR/AD5 OMIM phenotypes
Some data sources returned errors (2)

ensembl: Error: Ensembl fetch failed: 400 for https://rest.ensembl.org/lookup/symbol/homo_sapiens/CNE-2?content-type=application/json&expand=1

gnomad: Error: Gene not found

Population Genetics & Constraint

Constraint data not available from gnomAD.

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

CNE-2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

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