CHRDL1

Chr XXLR

chordin like 1

Antagonizes the function of BMP4 by binding to it and preventing its interaction with receptors. Alters the fate commitment of neural stem cells from gliogenesis to neurogenesis. Contributes to neuronal differentiation of neural stem cells in the brain by preventing the adoption of a glial fate. May play a crucial role in dorsoventral axis formation. May play a role in embryonic bone formation (By similarity). May also play an important role in regulating retinal angiogenesis through modulation of BMP4 actions in endothelial cells. Plays a role during anterior segment eye development

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Megalocornea 1, X-linkedMIM #309300
XLR

Clinical highlights

Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype) and the gene is intolerant of it in the population — truncating, frameshift and canonical splice variants carry more prior weight here than missense.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
26
Pubs (1 yr)
P/LP submissions
P/LP missense
0.52
LOEUF
LOF
Mechanism· G2P
Some data sources returned errors (1)

ncbi: Error: NCBI fetch failed: 429 https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esearch.fcgi

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.52LOEUF
pLI 0.216
Z-score 3.13
OE 0.25 (0.130.52)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
0.45Z-score
OE missense 0.91 (0.801.03)
161 obs / 177.9 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.25 (0.130.52)
00.351.4
Missense OE?0.91 (0.801.03)
00.61.4
Synonymous OE?1.03
01.21.6
LoF obs/exp: 5 / 20.2Missense obs/exp: 161 / 177.9Syn Z: -0.20

ClinVar

No ClinVar data available.

Protein Context — Lollipop Plot

CHRDL1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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