CENPE

Chr 4

centromere protein E

Also known as: CENP-E, KIF10, MCPH13, PPP1R61

Centrosome-associated protein E (CENPE) is a kinesin-like motor protein that accumulates in the G2 phase of the cell cycle. Unlike other centrosome-associated proteins, it is not present during interphase and first appears at the centromere region of chromosomes during prometaphase. This protein is required for stable spindle microtubule capture at kinetochores which is a necessary step in chromosome alignment during prometaphase. This protein also couples chromosome position to microtubule depolymerizing activity. Alternative splicing results in multiple transcript variants encoding distinct protein isoforms. [provided by RefSeq, Nov 2014]

ResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

UniProtMicrocephaly 13, primary, autosomal recessive

Clinical highlights

Gene-disease validity (ClinGen)
autosomal recessive primary microcephaly · ARLimitednot for standalone diagnostic reporting
Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
29
Pubs (1 yr)
P/LP submissions
P/LP missense
0.31
LOEUF· LoF intol.
DN
Mechanism· predicted
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

LoF intolerant — likely haploinsufficient
LoF Constraint?
0.31LOEUF
pLI 0.241
Z-score 8.44
OE 0.23 (0.170.31)
Highly constrained

Highly LoF-intolerant (top ~10% of genes)

Missense Constraint?
1.27Z-score
OE missense 0.90 (0.850.94)
1113 obs / 1238.3 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.23 (0.170.31)
00.351.4
Missense OE?0.90 (0.850.94)
00.61.4
Synonymous OE?1.04
01.21.6
LoF obs/exp: 32 / 139.6Missense obs/exp: 1113 / 1238.3Syn Z: -0.64

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

CENPE · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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