CDRT4

Chr 17ADAR

CMT1A duplicated region transcript 4

CDRT4 encodes a protein involved in peripheral nerve myelination and maintenance. Mutations cause various forms of Charcot-Marie-Tooth disease (types 1A and 1E), Dejerine-Sottas disease, recurrent neuropathy with pressure palsies, and Roussy-Levy syndrome, primarily affecting peripheral nerves with demyelinating features. The inheritance pattern is typically autosomal dominant, though autosomal recessive forms have been reported.

OMIMResearchSummary from OMIM
MultiplemechanismAD/ARLOEUF 1.886 OMIM phenotypes
Clinical SummaryCDRT4
Population Constraint (gnomAD)
Low constraint (pLI 0.10) — loss-of-function variants are relatively tolerated in the population.
📋
ClinVar Variants
118 unique Pathogenic / Likely Pathogenic· 24 VUS of 150 total submissions

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.88LOEUF
pLI 0.096
Z-score 0.08
OE 0.92 (0.251.88)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
0.04Z-score
OE missense 0.99 (0.831.18)
87 obs / 87.9 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.92 (0.251.88)
00.351.4
Missense OE0.99 (0.831.18)
00.61.4
Synonymous OE1.02
01.21.6
LoF obs/exp: 1 / 1.1Missense obs/exp: 87 / 87.9Syn Z: -0.11
DN
0.74top 25%
GOF
0.81top 10%
LOF
0.3549th %ile

This gene has evidence for multiple mechanisms of pathogenicity (gain-of-function and dominant-negative). Both the Badonyi & Marsh prediction and the broader genomic evidence point to gain-of-function as the predominant mechanism. Different variants in this gene may act through different mechanisms — interpret in context of the specific variant.

GOFprediction above median
DNprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

150 submitted variants in ClinVar

Classification Summary

Pathogenic115
Likely Pathogenic3
VUS24
Likely Benign7
115
Pathogenic
3
Likely Pathogenic
24
VUS
7
Likely Benign

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
0
0
115
0
115
Likely Pathogenic
0
0
3
0
3
VUS
0
19
5
0
24
Likely Benign
0
5
2
0
7
Benign
0
0
0
0
0
Total0241250149

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

CDRT4 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →
Clinical Literature
Open Research Assistant →
Key Publications
Landmark & review papers · by relevance
PubMed
Top 3 results · since 2015Search PubMed ↗
Recent Gene-Specific Literature
Gene in title · MEDLINE · newest first
Europe PMC

No open access results found