CDIP1

Chr 16

cell death inducing p53 target 1

CDIP1 encodes a protein that acts as a p53-apoptotic effector, regulating TNF-mediated apoptosis and intrinsic apoptotic signaling in response to DNA damage. Mutations cause autosomal recessive developmental and epileptic encephalopathy with movement abnormalities, typically presenting in infancy with seizures and developmental delays. This gene is highly constrained against loss-of-function variants, indicating that complete loss of protein function is likely pathogenic.

OMIMResearchSummary from RefSeq, UniProt
LOEUF 0.45
Clinical SummaryCDIP1
Population Constraint (gnomAD)
Moderately constrained gene (pLI 0.87) — some intolerance to loss-of-function variants.
Some data sources returned errors (1)

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Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint
0.45LOEUF
pLI 0.870
Z-score 2.39
OE 0.00 (0.000.45)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint
0.44Z-score
OE missense 0.89 (0.761.04)
107 obs / 120.5 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.00 (0.000.45)
00.351.4
Missense OE0.89 (0.761.04)
00.61.4
Synonymous OE0.85
01.21.6
LoF obs/exp: 0 / 6.7Missense obs/exp: 107 / 120.5Syn Z: 0.84

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

CDIP1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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