CDH15

Chr 16AD

cadherin 15

Also known as: CDH14, CDH3, CDHM, MCAD, MRD3

This gene is a member of the cadherin superfamily of genes, encoding calcium-dependent intercellular adhesion glycoproteins. Cadherins consist of an extracellular domain containing 5 cadherin domains, a transmembrane region, and a conserved cytoplasmic domain. Transcripts from this particular cadherin are expressed in myoblasts and upregulated in myotubule-forming cells. The protein is thought to be essential for the control of morphogenetic processes, specifically myogenesis, and may provide a trigger for terminal muscle cell differentiation. [provided by RefSeq, Jul 2008]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Intellectual developmental disorder, autosomal dominant 3MIM #612580
AD

Clinical highlights

Gene-disease validity (ClinGen)
intellectual disability · ADDisputedevidence questions this relationship
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype), though the gene is not strongly LoF-constrained in the population — weigh truncating variants against that tolerance.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
18
Pubs (1 yr)
P/LP submissions
P/LP missense
1.10
LOEUF
LOF*
Mechanism· G2P

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.10LOEUF
pLI 0.000
Z-score 1.09
OE 0.79 (0.581.10)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
-1.01Z-score
OE missense 1.12 (1.051.20)
591 obs / 526.0 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?0.79 (0.581.10)
00.351.4
Missense OE?1.12 (1.051.20)
00.61.4
Synonymous OE?1.18
01.21.6
LoF obs/exp: 25 / 31.6Missense obs/exp: 591 / 526.0Syn Z: -2.20

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

CDH15 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →