CD48

Chr 1

CD48 molecule

Also known as: BCM1, BLAST, BLAST1, MEM-102, SLAMF2, hCD48, mCD48

This gene encodes a member of the CD2 subfamily of immunoglobulin-like receptors which includes SLAM (signaling lymphocyte activation molecules) proteins. The encoded protein is found on the surface of lymphocytes and other immune cells, dendritic cells and endothelial cells, and participates in activation and differentiation pathways in these cells. The encoded protein does not have a transmembrane domain, however, but is held at the cell surface by a GPI anchor via a C-terminal domain which maybe cleaved to yield a soluble form of the receptor. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Dec 2011]

GeneReviewsResearchGenerating clinical summary…
0
Active trials
62
Pubs (1 yr)
P/LP submissions
P/LP missense
1.49
LOEUF
Multiple*
Mechanism· predicted
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GeneReview available — CD48
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Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.49LOEUF
pLI 0.000
Z-score 0.48
OE 0.83 (0.491.49)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
0.04Z-score
OE missense 0.99 (0.861.15)
125 obs / 126.2 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.83 (0.491.49)
00.351.4
Missense OE?0.99 (0.861.15)
00.61.4
Synonymous OE?1.02
01.21.6
LoF obs/exp: 8 / 9.6Missense obs/exp: 125 / 126.2Syn Z: -0.14

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

CD48 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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