CCL2

Chr 17

C-C motif chemokine ligand 2

Also known as: GDCF-2, HC11, HSMCR30, MCAF, MCP-1, MCP1, SCYA2, SMC-CF

This gene is one of several cytokine genes clustered on the q-arm of chromosome 17. Chemokines are a superfamily of secreted proteins involved in immunoregulatory and inflammatory processes. The superfamily is divided into four subfamilies based on the arrangement of N-terminal cysteine residues of the mature peptide. This chemokine is a member of the CC subfamily which is characterized by two adjacent cysteine residues. This cytokine displays chemotactic activity for monocytes and basophils but not for neutrophils or eosinophils. It has been implicated in the pathogenesis of diseases characterized by monocytic infiltrates, like psoriasis, rheumatoid arthritis and atherosclerosis. It binds to chemokine receptors CCR2 and CCR4. Elevated expression of the encoded protein is associated with severe acute respiratory syndrome coronavirus 2 (SARS‐CoV‐2) infection. [provided by RefSeq, Aug 2020]

Primary Disease Associations & Inheritance

{HIV-1, resistance to}MIM #609423
12
Active trials
25
ClinVar variants
4
Pathogenic / LP
1.2
Missense Z
1.00
LOEUF
8
Pubs (2 yr)
Clinical SummaryCCL2
Population Constraint (gnomAD)
Moderately constrained gene (pLI 0.61) — some intolerance to loss-of-function variants.
📋
ClinVar Variants
4 Pathogenic / Likely Pathogenic· 17 VUS of 25 total submissions
💊
Clinical Trials
12 active or recruiting trials — potential therapeutic options may be available

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?LOEUF (Loss-of-function Observed/Expected Upper bound Fraction) is the upper bound of the 90% CI for LoF OE — the preferred gnomAD v4 metric. Lower = more intolerant to LoF. LOEUF < 0.35 = highly constrained.
1.00LOEUF
pLI 0.608
Z-score 1.59
OE 0.00 (0.001.00)
Moderately constrained

Typical tolerance to LoF variation

Missense Constraint?Missense Z-score: standard deviations fewer missense variants observed vs. expected. Z > 3.09 (p < 0.001) = gene does not tolerate missense variation. OE missense < 0.6 is also considered constrained.
1.19Z-score
OE missense 0.54 (0.400.74)
29 obs / 53.5 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?Shaded band = 90% confidence interval. Vertical tick = point estimate. Grey threshold line = gnomAD constraint cutoff for that variant class.
LoF OE?Ratio of observed to expected LoF variants. Upper CI bound (LOEUF) ≤ 0.35 = strong LoF constraint signal.0.00 (0.001.00)
00.351.4
Missense OE?Ratio of observed to expected missense variants. OE ≤ 0.6 = fewer missense variants than expected by chance.0.54 (0.400.74)
00.61.4
Synonymous OE?Control metric — synonymous variants are largely neutral and expected near OE = 1.0. Significant deviation may indicate annotation issues.1.06
01.21.6
LoF obs/exp: 0 / 3.0Missense obs/exp: 29 / 53.5Syn Z: -0.21

ClinVar Variant Classifications

25 submitted variants in ClinVar

Classification Summary

Pathogenic4
VUS17
Likely Benign3
Benign1
4
Pathogenic
17
VUS
3
Likely Benign
1
Benign

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
0
0
4
0
4
Likely Pathogenic
0
0
0
0
0
VUS
0
6
11
0
17
Likely Benign
0
0
2
1
3
Benign
0
0
0
1
1
Total0617225

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

CCL2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

OMIM — Genotype-Phenotype Relationships

1 OMIM entry

{HIV-1, resistance to}

MIM #609423

Molecular basis of disorder known

Clinical Literature
Landmark / reviewRecent case evidence
Full-Text Mentions
NLP-detected gene mentions in article bodies · via PubTator3
PubTator3
Rational Design of de novo CCL2 Binding Peptides
Davidoff Aguas E et al.·Adv Theory Simul
2023
Role of CC-chemokine ligand 2 in gynecological cancer
Zhang JJ et al.·Cancer Cell Int
2022
Top 10 full-text resultsSearch PubTator3 ↗

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

RETT Syndrome With Proven MECP2 MutationRett Syndrome

Efficacy and Safety of NTI164 in Children and Young Adults With Rett Syndrome

NOT YET RECRUITING
NCT07257978Phase PHASE2, PHASE3Fenix Innovation GroupStarted 2026-07-01
NTI164Placebo
Low Back Pain

The Prognostic Value of Biomarkers and the Effect of Tolperisone in Acute Low Back Pain and Sciatic Pain "BETA"

ACTIVE NOT RECRUITING
NCT05544656Phase PHASE3Semmelweis UniversityStarted 2019-12-13
Tolperisone HydrochloridePlacebo
DysferlinopathyMiyoshi MyopathyLGMDR2

Clinical, Immunological, Morphological and Genetic Characteristics of Patients With Dysferlinopathy (LGMD R2) in the RF

ENROLLING BY INVITATION
NCT04824040Artgen BiotechStarted 2020-01-15
COPD

Immuno-inflammatory Response of Erdosteine in COPD

NOT YET RECRUITING
NCT07329946Phase NAPierachille Santus, MD, PhDStarted 2026-02-28
ErdosteineStandard of Care (SOC)
Atherosclerosis Cardiovascular DiseaseObesityMetabolic Syndrome

Deciphering the Effect of Moderate Wine Consumption on Healthy Aging Through Postprandial Extracellular Vesicles.

RECRUITING
NCT07361887Phase NAUniversity of SevilleStarted 2025-11-01
White WineRed WineWater
Iron DeficiencyIron Deficiency Anaemia

Assessing the Effect of a Mineral-enriched Powder on Iron Deficiency in Women of Reproductive Age

ACTIVE NOT RECRUITING
NCT05990166Phase PHASE2Carleton UniversityStarted 2023-04-27
Mineral-enriched powderPlacebo powder
Amyotrophic Lateral Sclerosis (ALS)

A Patient-tailored Genetic/Biomarker/iPSC Combined Approach in ALS - PERMEALS

RECRUITING
NCT06917924A.O.U. Città della Salute e della ScienzaStarted 2023-05-20
lumbar puncture
Idiopathic Intracranial Hypertension

Biomarkers in the Etiology of Idiopathic Intracranial Hypertension

RECRUITING
NCT06059703Phase NAUniversity Hospital, MontpellierStarted 2023-11-27
Blood punctionCentral blood samplingIntracranial pressure measurement
AutismAutism Spectrum DisorderAutism Disorder

NTI164 in Autism Spectrum Disorder

NOT YET RECRUITING
NCT07257939Phase PHASE3Fenix Innovation GroupStarted 2026-07-01
NTI164Placebo
Breast CancerBladder CancerKidney Cancer

Germline Alterations of Tumor Susceptibility Genes in New York Cancer Patients

ACTIVE NOT RECRUITING
NCT00579514Phase NAMemorial Sloan Kettering Cancer CenterStarted 2000-03
PCR/PCR/LDR Strategy
Non-Allergic Rhinitis With Eosinophilia Syndrome

Efficacy and Safety of Stapokibart in Non-Allergic Rhinitis With Eosinophilia Syndrome

NOT YET RECRUITING
NCT07240376Phase NAHuazhong University of Science and TechnologyStarted 2025-11-25
Stapokibart (CM310)Placebo
Alcohol Use DisorderRisk Behavior, HealthDysbiosis

Alcohol Misuse, Gut Microbial Dysbiosis and PrEP Care Continuum: Application and Efficacy of SBIRT Intervention

RECRUITING
NCT06005298Phase NAShirish S BarveStarted 2023-08-01
Screening, Brief Intervention, Referral to Treatment (SBIRT)