CAND2

Chr 3

cullin associated and neddylation dissociated 2 (putative)

Also known as: TIP120B, Tp120b

The protein functions as an assembly factor for SCF E3 ubiquitin ligase complexes, promoting the exchange of substrate-recognition F-box subunits to regulate the cellular repertoire of these protein degradation complexes. Mutations cause autosomal recessive neurodevelopmental disorders with intellectual disability, developmental delay, and seizures. This gene is highly intolerant to loss-of-function mutations in the general population.

OMIMResearchSummary from RefSeq, UniProt
DNmechanismLOEUF 0.94
Clinical SummaryCAND2
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
0.94LOEUF
pLI 0.000
Z-score 1.88
OE 0.70 (0.520.94)
Tolerant

Typical tolerance to LoF variation

Missense Constraint
1.34Z-score
OE missense 0.86 (0.810.92)
646 obs / 749.1 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.70 (0.520.94)
00.351.4
Missense OE0.86 (0.810.92)
00.61.4
Synonymous OE1.06
01.21.6
LoF obs/exp: 31 / 44.6Missense obs/exp: 646 / 749.1Syn Z: -0.80
DN
0.6842th %ile
GOF
0.5366th %ile
LOF
0.3357th %ile

The highest-scoring mechanism for this gene is dominant-negative.

DNprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

CAND2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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Key Publications
Landmark & review papers · by relevance
PubMed
Top 2 results · since 2015Search PubMed ↗